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http://chibba.pgml.uga.edu/mcscan2/

 

MCScanX

About Please be sure to direct your questions to wyp1125@gmail.com MCScan is an algorithm to scan multiple genomes or subgenomes to identify putative homologous chromosomal regions, then align these regions using genes as anchors. MCScanX toolkit implement

chibba.pgml.uga.edu

$ wget http://chibba.pgml.uga.edu/mcscan2/MCScanX.zip

$ unzip MCScanX.zip

$ cd MCScanX/

 

#### 64bit 인 경우

$ vi msa.h

~~~

#include <unistd.h>

~~~

 

$ vi dissect_multiple_alignment.h

~~~

#include <unistd.h>

~~~

 

$ vi detect_collinear_tandem_arrays.h

~~~

#include <unistd.h>

~~~

 

$ make

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