전체 글 검색 결과
403 개의 검색 결과가 있습니다.
Lang_Development/R

R 설치

다운로드 : www.r-project.org/ 설치 : # cd /usr/local/src/ # wget http://cran.nexr.com/src/base/R-2/R-2.15.2.tar.gz # tar zxvfp R-2.15.2.tar.gz # cd R-2.15.2 # ./configure --prefix=/usr/local/R-2.15.2 # make && make install # echo "export PATH=/usr/local/R-2.15.0/bin/:\$PATH" >> /etc/profile # source /etc/profile # which R /usr/local/R-2.15.0/bin/R # R > source("http://bioconductor.org/biocLite.R") > b..

2012. 6. 6. 13:09
Lang_Development/Python

easy_install 설치

# yum -y install python-setuptools.noarch # wget https://bootstrap.pypa.io/ez_setup.py # python ez_setup.py ## or python ez_setup.py -U setuptools

2012. 6. 6. 13:08
Lang_Development/Python

Python 설치

다운로드 : http://www.python.org 2.7.3 설치 : # cd /usr/local/src # wget https://www.python.org/ftp/python/2.7.13/Python-2.7.13.tgz # tar zxvfp Python-2.7.13.tgz # cd Python-2.7.13 # ./configure --prefix=/usr/local/python-2.7.13 # make && make install # echo "export PATH=\$PATH:/usr/local/python-2.7.13/bin/" >> /etc/profile # source /etc/profile # which python2.7 /usr/local/python-2.7.3/bin/python2.7 ..

2012. 6. 6. 13:08
Tools/Bio Tools

Cufflinks 설치

1. Installing Boost http://isbyeon.tistory.com/entry/Boost-C-Libraries-%EC%84%A4%EC%B9%98 2. Installing the SAM tools http://isbyeon.tistory.com/entry/SAMtools-%EC%84%A4%EC%B9%98 3. Installing the Eigen libraries 다운로드 : http://eigen.tuxfamily.org/index.php?title=Main_Page 설치 : 방법1) # wget http://bitbucket.org/eigen/eigen/get/3.1.2.tar.bz2 # tar jxvfp 3.1.2.tar.bz2 # export CFLAGS="-I/usr/local/s..

2012. 6. 4. 16:58
Tools/Bio Tools

TopHat 설치

1. Download and extract the latest Bowtie 2 (or Bowtie) releases.http://ctrlcv.co.cc/entry/bowtie-%EC%84%A4%EC%B9%98 2. Installing Boosthttp://ctrlcv.co.cc/entry/Boost-C-Libraries-%EC%84%A4%EC%B9%98 3. Installing the SAM toolshttp://ctrlcv.co.cc/entry/SAMtools-%EC%84%A4%EC%B9%98 4. Building TopHat다운로드 : http://tophat.cbcb.umd.edu/설치 : # cd /usr/local/src# wget http://tophat.cbcb.umd.edu/download..

2012. 6. 4. 15:48
Tools/Bio Tools

SAMtools 설치

다운로드 : http://sourceforge.net/projects/samtools/files/설치 :# cd /usr/local/src# wget http://sourceforge.net/projects/samtools/files/samtools/0.1.18/samtools-0.1.18.tar.bz2/download# tar jxvfp samtools-0.1.18.tar.bz2 # cd samtools-0.1.18# make# mkdir -p /usr/local/bam/lib# mkdir -p /usr/local/bam/include/bam# cp libbam.a /usr/local/bam/lib/# cp *.h /usr/local/bam/include/bam/# mv /usr/local/src/sa..

2012. 6. 4. 15:22